Packages

ca.cas.control	Provides classes for controlling the cas application.
ca.cas.montecarlo	Provides classes which simulate various stages in the process of forming chromosome aberrations.
ca.cas.multigraph	Provides classes for use in creating a multigraph representation of a Genome.
ca.cas.nucleus	Provides classes which model physical aspects of the nucleus such as chromosomes and the genome.
ca.cas.painting	Provides classes for simulating chromosome painting.
ca.cas.patterns	Provides classes for working with patterns.
ca.cas.utilities	Provides classes to be used throughout the CAS application in calculations.